Using the package as a library

PacBio Data Processing has not been thought to be used as a library. The project’s aim is to provide an executable program, sm-analysis (and another utility kept for historical reasons bam-filter).

Nevertheless, if you think that some functionality in PacBio Data Processing could help in your own codebase, feel free to:

import pacbio_data_processing

or whatever other module you are interested in.

And, please, have a look at How to contribute. Maybe you have an idea to improve the project. We will be glad to hear about that.